DB6 Release
October 16, 2019
We are pleased to announce the newest release of MSSNG, on October 16, 2019 containing 11,364 whole genomes! The web portal for this data release can be found at https://research.mss.ng.
Details on the October 16, 2019 data release can be found in the MSSNG Researcher README (datarelease_201910)
Notable updates to the data or portal can always be found in the CHANGELOG.
Here are some high-level statistics on the data available:
| Previous release (DB5) | Current release (DB6) | |
|---|---|---|
| Total genomes | 7,231 | 11,364 |
| ASD genomes | 3,442 | 5,134 |
| Families | 2,720 | 4,231 |
| Reference genome | GRCh37/hg19 | GRCh38/hg38 |
| SNV/indel genotyping | Single-sample | Joint |
| Cohort | SPX | MPX | Ilummina HiSeq | Complete Genomics | Illumina HiSeqX | Total ASD GEnomes | Total Genomes |
|---|---|---|---|---|---|---|---|
| AGRE | 450 | 952 | - | - | 1,402 | 729 | 1,402 |
| AGRE; Autism Simplex Collection (ASC) | 563 | - | - | - | 563 | 221 | 563 |
| AGRE; Autism Treatment Network | 318 | 20 | - | - | 338 | 192 | 338 |
| ASD: Genomes to Outcomes Study | 4,279 | 1,626 | 291 | 1,240 | 4,374 | 2,889 | 5,905 |
| Autism Phenome Project | 221 | 12 | - | - | 233 | 100 | 233 |
| Baby Siblings Research Consortium | 396 | 173 | 12 | 148 | 409 | 200 | 569 |
| Baby Siblings Research Consortium; ASC | 15 | 3 | 12 | 6 | - | 6 | 18 |
| Infant Sibling Study (ISS) | 107 | 109 | 12 | 120 | 84 | 87 | 216 |
| ISS; ASC | 7 | 4 | 4 | 7 | - | 4 | 11 |
| iTARGET | 250 | 197 | - | 9 | 438 | 189 | 447 |
| Pathways in ASD | 52 | 26 | - | 70 | 8 | 34 | 78 |
| The Autism Simplex Collection (TASC) | 457 | 44 | 267 | 139 | 95 | 169 | 501 |
| REACH | 1,083 | - | - | 314 | 1,083 | ||
| TOTAL | 1,681 | 1,739 | 7,944 | 5,134 | 11,364 |
Questions can be addressed to asgenetics@autismspeaks.org.